Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| virb8 | OCAR_7701 | Q6G2B4 | + | 3662784 - 3663500 | 26632.6 |
| p-type conjugative transfer protein virb9 | OCAR_7702 | Q6FYW2 | + | 3663497 - 3664300 | 29690.1 |
| conjugal transfer protein | OCAR_7703 | Q8YDZ0 | + | 3664303 - 3665652 | 48123.1 |
| p-type dna transfer atpase virb11 | OCAR_7704 | Q9RNC7 | + | 3665615 - 3666673 | 38990.9 |
| trag protein | OCAR_7705 | P09817 | + | 3666651 - 3668807 | 79610.3 |
| putative transporter | OCAR_7706 | O26929 | - | 3669016 - 3670065 | 37492.2 |
| sugar transport/efflux pump | OCAR_7707 | Not Available | - | 3670065 - 3670301 | 7983.65 |
| conserved hypothetical protein | OCAR_7708 | Not Available | - | 3670572 - 3670775 | 8019.47 |
| hypothetical protein | OCAR_7709 | Not Available | + | 3670746 - 3670892 | 5256.36 |
| tetratricopeptide repeat domain protein | OCAR_7710 | P0AFB3 | - | 3671074 - 3672363 | 47684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.