Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | OCA5_RS01540 | Not Available | + | 319006 - 319254 | 9035.8 |
| dna -binding domain-containing protein | OCA5_RS01545 | Not Available | + | 319365 - 319625 | 10076.9 |
| transcriptional regulator domain-containing protein | OCA5_RS19410 | Not Available | + | 319759 - 320064 | 11860.0 |
| duf2285 domain-containing protein | OCA5_RS01550 | Not Available | + | 319970 - 320524 | 20223.6 |
| helix-turn-helix transcriptional regulator | OCA5_RS01555 | Not Available | + | 320654 - 320935 | 10232.2 |
| replication initiator protein a | OCA5_RS01560 | Not Available | + | 320953 - 322113 | 43620.8 |
| para family partition atpase | OCA5_RS01565 | Not Available | + | 322110 - 322763 | 23097.0 |
| hypothetical protein | OCA5_RS01570 | Not Available | + | 322760 - 323011 | 9150.94 |
| duf2840 domain-containing protein | OCA5_RS01575 | Not Available | + | 323008 - 323529 | 19772.8 |
| s26 family signal peptidase | OCA5_RS01580 | Not Available | + | 323526 - 324071 | 19576.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.