Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein, copg family | OCAR_7609 | Not Available | - | 3563930 - 3564388 | 16453.7 |
| trag protein | OCAR_7610 | Q00185 | - | 3564398 - 3566389 | 73417.8 |
| transcriptional regulator, lysr family | OCAR_7611 | Q04778 | - | 3566626 - 3567942 | 47434.5 |
| hypothetical protein | OCAR_7612 | Not Available | + | 3568343 - 3568483 | 5004.94 |
| sigma-24 | OCAR_7613 | G8QM61 | + | 3569783 - 3570337 | 20582.6 |
| protein of unknown function | OCAR_7614 | G8QM60 | + | 3570334 - 3570975 | 22731.6 |
| hypothetical protein | OCAR_7615 | Not Available | + | 3571258 - 3571545 | 10437.8 |
| conserved hypothetical protein | OCAR_7616 | Not Available | + | 3571582 - 3571851 | 9692.82 |
| secretion protein hlyd | OCAR_7617 | P77239 | + | 3572045 - 3573697 | 59574.1 |
| conserved hypothetical protein | OCAR_7620 | P77214 | + | 3576738 - 3577148 | 14017.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.