Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7598 | Not Available | - | 3554276 - 3554509 | 8415.36 |
| conjugal transfer protein trbg/virb9/cagx | OCAR_7600 | P55404 | - | 3555668 - 3556624 | 34297.1 |
| conjugal transfer protein | OCAR_7601 | P54914 | - | 3556621 - 3557310 | 25803.5 |
| conjugal transfer protein trbl | OCAR_7602 | P54913 | - | 3557307 - 3558653 | 44452.6 |
| conserved hypothetical protein | OCAR_7603 | Not Available | - | 3558653 - 3558943 | 10509.5 |
| p-type conjugative transfer protein trbj | OCAR_7604 | P55400 | - | 3558965 - 3559723 | 27240.6 |
| putative conjugal transfer protein trbe | OCAR_7605 | P54910 | - | 3559720 - 3562176 | 89696.1 |
| conjugal transfer protein trbb | OCAR_7606 | Not Available | - | 3562191 - 3562472 | 9964.42 |
| conjugal transfer protein trbc | OCAR_7607 | P54908 | - | 3562472 - 3562804 | 11654.5 |
| p-type conjugative transfer atpase trbb | OCAR_7608 | P55395 | - | 3562801 - 3563784 | 34301.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.