Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdenum import atp-binding protein modc 1 | OCAR_7588 | Q98KI3 | + | 3544008 - 3544673 | 24570.9 |
| periplasmic binding protein | OCAR_7589 | Not Available | - | 3544695 - 3545564 | 30509.1 |
| fe uptake system integral membrane protein | OCAR_7590 | O34451 | + | 3545646 - 3546653 | 34000.8 |
| ferric enterobactin transport atp-binding protein fepc | OCAR_7591 | Q5YVL8 | + | 3546650 - 3547435 | 27965.0 |
| cell volume regulation protein a | OCAR_7592 | A4XPR4 | - | 3547446 - 3549239 | 64161.2 |
| mscs mechanosensitive ion channel | OCAR_7593 | P39285 | + | 3549282 - 3550802 | 54965.6 |
| methionine aminopeptidase, type i | OCAR_7594 | Q9ZCD3 | + | 3550904 - 3551731 | 29781.9 |
| dna repair protein radc | OCAR_7595 | Q2J299 | + | 3551819 - 3552436 | 22998.5 |
| probable integrase | OCAR_7596 | Not Available | + | 3552585 - 3553838 | 47980.7 |
| conserved hypothetical protein | OCAR_7597 | Not Available | + | 3553943 - 3554236 | 11126.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.