Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| altronate hydrolase | OCAR_7558 | Q58Y44 | - | 3514437 - 3514724 | 10240.5 |
| gntr-family transcriptional regulator | OCAR_7559 | Q82IW0 | + | 3514850 - 3515569 | 26950.6 |
| phosphoglucomutase/phosphomannomutase | OCAR_7560 | Q88C93 | - | 3515657 - 3517156 | 54647.7 |
| hypothetical protein | OCAR_7561 | Not Available | + | 3517169 - 3517282 | 3786.57 |
| conserved hypothetical protein | OCAR_7562 | Q4V7T1 | + | 3517298 - 3517897 | 21461.8 |
| retroviral aspartyl protease domain protein | OCAR_7563 | P29938 | - | 3518038 - 3518562 | 18935.0 |
| atp-dependent helicase hrpb | OCAR_7564 | P37024 | - | 3518754 - 3521282 | 90665.5 |
| udp-glucose 6-dehydrogenase | OCAR_7565 | O54068 | - | 3521480 - 3522787 | 46840.3 |
| acyltransferase 3 | OCAR_7566 | P75955 | + | 3522974 - 3524020 | 38701.9 |
| dna polymerase i (pol i) | OCAR_7567 | Q9S1G2 | + | 3524224 - 3527235 | 109890.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.