Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical sugar kinase yihv | OCAR_7547 | P32143 | + | 3503608 - 3504552 | 33462.3 |
| glutamate uptake regulatory protein | OCAR_7548 | P0ACJ7 | + | 3504649 - 3505158 | 18624.7 |
| transcriptional regulator of lysr family | OCAR_7550 | P0ACR6 | + | 3506354 - 3507238 | 31883.7 |
| l-sulfolactate dehydrogenase | OCAR_7551 | Q1QWN5 | - | 3507387 - 3508379 | 33303.2 |
| d-3-phosphoglycerate dehydrogenase (pgdh) | OCAR_7552 | Q1QWN6 | - | 3508382 - 3509293 | 31775.4 |
| hypothetical protein | OCAR_7553 | P70791 | - | 3509390 - 3510367 | 34460.6 |
| putative membrane protein | OCAR_7554 | P70794 | + | 3510592 - 3511221 | 22490.4 |
| tcta protein | OCAR_7555 | P70795 | + | 3511218 - 3512720 | 52558.3 |
| hypothetical protein | OCAR_7556 | Not Available | + | 3512750 - 3512896 | 5695.84 |
| sulfolactate sulfo-lyase large subunit | OCAR_7557 | Q58Y43 | - | 3513239 - 3514420 | 42452.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.