Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine nucleosidase | OCAR_7537 | B0URX4 | + | 3493813 - 3494373 | 20458.4 |
| trna pseudouridine synthase a | OCAR_7538 | B6JJP6 | - | 3494541 - 3495278 | 27218.3 |
| methionyl-trna formyltransferase | OCAR_7539 | B6JJP7 | - | 3495454 - 3496386 | 33182.8 |
| peptide deformylase | OCAR_7540 | B6JJP8 | - | 3496534 - 3497049 | 19368.5 |
| rmuc domain protein | OCAR_7541 | Q9PG89 | + | 3497189 - 3498391 | 44254.6 |
| protein ampg | OCAR_7542 | P0AE17 | + | 3498478 - 3499848 | 48180.2 |
| recombination protein recr | OCAR_7543 | B6JJQ1 | - | 3499849 - 3500454 | 21596.2 |
| conserved hypothetical protein | OCAR_7544 | B6JJQ2 | - | 3500456 - 3500773 | 11441.1 |
| dna polymerase iii, subunits gamma and tau | OCAR_7545 | P06710 | - | 3500788 - 3502686 | 68520.7 |
| histidine triad | OCAR_7546 | Not Available | + | 3503092 - 3503505 | 15414.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.