Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS01495 | Not Available | + | 307918 - 308475 | 20005.2 |
| hypothetical protein | OCA5_RS01500 | Not Available | + | 308539 - 308955 | 14996.3 |
| hypothetical protein | OCA5_RS01505 | Not Available | + | 308948 - 309592 | 25022.9 |
| bifunctional class i sam-dependent methyltransferase/dead/deah box helicase | OCA5_RS01510 | Not Available | + | 309750 - 314081 | 156094.0 |
| toprim domain-containing protein | OCA5_RS01515 | Not Available | + | 314081 - 315121 | 37336.8 |
| duf2493 domain-containing protein | OCA5_RS01520 | Not Available | + | 315467 - 316393 | 34482.6 |
| hypothetical protein | OCA5_RS01525 | Not Available | - | 316657 - 316956 | 10728.0 |
| hypothetical protein | OCA5_RS19230 | Not Available | + | 317177 - 317344 | 5853.81 |
| hypothetical protein | OCA5_RS01530 | Not Available | + | 317481 - 317921 | 15180.2 |
| duf736 domain-containing protein | OCA5_RS01535 | Not Available | + | 318488 - 318814 | 11901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.