Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator marr/emrr family | OCAR_7517 | P0ACS1 | + | 3472896 - 3473357 | 17592.6 |
| glutamyl-trna(gln) amidotransferase subunit a | OCAR_7518 | A9WCD8 | + | 3473358 - 3474665 | 46067.0 |
| heavy metal transport/detoxification protein | OCAR_7519 | Not Available | - | 3474762 - 3474956 | 6626.04 |
| copper-translocating p-type atpase | OCAR_7520 | P58342 | + | 3475107 - 3477575 | 85912.7 |
| cu(i)-responsive transcriptional regulator | OCAR_7521 | P58379 | + | 3477618 - 3478061 | 16637.8 |
| glutathione import atp-binding protein gsia | OCAR_7522 | Q1RE96 | + | 3478439 - 3480487 | 74990.8 |
| extracellular solute-binding protein, family 5 | OCAR_7523 | Q8VQK3 | + | 3480623 - 3482155 | 57085.8 |
| dipeptide transport system permease protein dppb | OCAR_7524 | A1A970 | + | 3482232 - 3483185 | 35639.7 |
| glutathione transport system permease protein gsid | OCAR_7525 | P94312 | + | 3483187 - 3484083 | 32191.0 |
| Trna-arg | Not Available | Not Available | + | 3484277 - 3484353 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.