Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal | OCAR_7507 | Q88FX8 | - | 3462983 - 3465190 | 79560.1 |
| isoquinoline 1-oxidoreductase subunit alpha | OCAR_7508 | Q88FX9 | - | 3465202 - 3465672 | 16857.6 |
| hypothetical protein | OCAR_7509 | Not Available | - | 3465706 - 3465828 | 4224.92 |
| aryldialkylphosphatase | OCAR_7510 | P40896 | - | 3466109 - 3467323 | 42360.9 |
| oligopeptide transport atp-binding protein appf | OCAR_7511 | Q53194 | - | 3467338 - 3468321 | 35568.2 |
| dipeptide transport atp-binding protein dppd | OCAR_7512 | P26905 | - | 3468312 - 3469304 | 36028.9 |
| oligopeptide transport system permease protein appc | OCAR_7513 | Q8FUW9 | - | 3469314 - 3470213 | 32247.4 |
| inner membrane abc transporter permease protein yddr | OCAR_7514 | P94311 | - | 3470210 - 3471139 | 33558.2 |
| oligopeptide abc transporter substrate-binding protein | OCAR_7515 | Q6D3B0 | - | 3471197 - 3472711 | 55677.0 |
| hypothetical protein | OCAR_7516 | Not Available | + | 3472697 - 3472846 | 5319.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.