Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type transporter, permease component: haat family | OCAR_7497 | P21628 | - | 3451551 - 3452699 | 40369.5 |
| inner-membrane translocator | OCAR_7498 | P21627 | - | 3452696 - 3453610 | 32303.7 |
| abc-type transporter, periplasmic component: haat family | OCAR_7499 | Q9HUQ0 | - | 3453629 - 3454783 | 41229.2 |
| transcriptional regulator, iclr family | OCAR_7500 | P77300 | + | 3455270 - 3456061 | 28685.3 |
| transcriptional regulator, lysr family | OCAR_7501 | P52685 | + | 3456089 - 3456985 | 32819.6 |
| conserved hypothetical protein | OCAR_7502 | Not Available | - | 3457100 - 3457714 | 21265.6 |
| hypothetical protein | OCAR_7503 | Not Available | + | 3457812 - 3457925 | 4098.9 |
| methylmalonate-semialdehyde dehydrogenase | OCAR_7504 | Q9I702 | + | 3457935 - 3459452 | 54408.3 |
| ggdef domain | OCAR_7505 | P77334 | - | 3459504 - 3461453 | 71553.6 |
| conserved hypothetical protein | OCAR_7506 | Not Available | - | 3461466 - 3462689 | 41760.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.