Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_7487 | Not Available | + | 3440616 - 3440738 | 4442.26 |
| asparagine synthase family | OCAR_7488 | Not Available | - | 3440965 - 3442761 | 66817.2 |
| conserved hypothetical protein | OCAR_7489 | Not Available | + | 3442852 - 3443286 | 15950.4 |
| abc transporter, permease/atp-binding protein | OCAR_7490 | Q57180 | - | 3443494 - 3445386 | 69397.5 |
| hypothetical protein | OCAR_7491 | Not Available | - | 3445611 - 3445724 | 4131.06 |
| protein-l-isoaspartate | OCAR_7492 | Q9YDA1 | - | 3445870 - 3446787 | 32547.7 |
| putative sensor histidine kinase | OCAR_7493 | P55183 | + | 3446929 - 3449184 | 81432.0 |
| response regulator | OCAR_7494 | P96686 | + | 3449232 - 3449921 | 25091.2 |
| high-affinity branched-chain amino acid transport protein | OCAR_7495 | P21630 | - | 3450068 - 3450784 | 25187.7 |
| high-affinity branched-chain amino acid transport atp-binding proteinlivg | OCAR_7496 | P0A194 | - | 3450781 - 3451554 | 28775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.