Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7467 | Q58170 | - | 3426070 - 3426432 | 12672.3 |
| sira domain protein | OCAR_7468 | A6V7T5 | - | 3426494 - 3426736 | 9140.92 |
| glutamyl-trna(gln) amidotransferase subunit a (glu-adtsubunit a) | OCAR_7469 | O28325 | - | 3427219 - 3428634 | 49712.5 |
| putative cyclase superfamily | OCAR_7470 | Q2S2F5 | - | 3428743 - 3429441 | 25803.1 |
| abc-type transporter, atpase component: haat family | OCAR_7471 | P21630 | - | 3429471 - 3430211 | 26621.6 |
| abc branched chain amino acid family transporter | OCAR_7472 | P21629 | - | 3430214 - 3432013 | 64020.6 |
| high-affinity branched-chain amino acid transport system permeaseprotein livh | OCAR_7473 | P0AEX8 | - | 3432010 - 3432897 | 30576.5 |
| twin-arginine translocation pathway signal | OCAR_7474 | Q8G3D4 | - | 3432997 - 3434190 | 42625.0 |
| transcriptional regulator of lysr family | OCAR_7475 | Q47005 | + | 3434519 - 3435445 | 34243.8 |
| hypothetical protein | OCAR_7476 | Not Available | - | 3435454 - 3435786 | 11734.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.