Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage integrase | OCAR_7447 | Not Available | + | 3403870 - 3405549 | 62719.8 |
| phage integrase | OCAR_7448 | Not Available | + | 3405712 - 3406638 | 33970.9 |
| cation efflux system protein czca | OCAR_7449 | P94177 | - | 3407442 - 3410519 | 109655.0 |
| secretion protein hlyd | OCAR_7450 | Q8XEH9 | - | 3410519 - 3411640 | 39201.3 |
| integral membrane protein | OCAR_7451 | Q9P6J2 | + | 3411942 - 3412742 | 27654.9 |
| calcium-binding ef-hand | OCAR_7452 | Q32N25 | - | 3413092 - 3413274 | 6848.08 |
| hhh-gpd domain protein | OCAR_7453 | Not Available | - | 3413773 - 3414321 | 20616.6 |
| conserved hypothetical protein | OCAR_7454 | Not Available | - | 3414331 - 3414540 | 7861.12 |
| hypothetical protein | OCAR_7455 | Not Available | + | 3414524 - 3414667 | 5293.57 |
| dna-3-methyladenine glycosylase i | OCAR_7456 | Not Available | + | 3415081 - 3415527 | 16457.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.