Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavin dependant oxidoreductase | OCAR_7437 | O34504 | - | 3389268 - 3390284 | 36836.3 |
| 5,10-methylenetetrahydrofolate reductase | OCAR_7438 | P0AEZ1 | + | 3390660 - 3391565 | 32943.9 |
| methionine synthase | OCAR_7439 | Q9I2Q2 | + | 3391740 - 3395600 | 141104.0 |
| conserved hypothetical protein | OCAR_7440 | Not Available | + | 3395840 - 3396451 | 21689.1 |
| glycerol kinase | OCAR_7441 | B6JJF0 | - | 3396516 - 3398012 | 53730.1 |
| 3-ketoacyl-coa thiolase b, peroxisomal | OCAR_7442 | Q56WD9 | - | 3398125 - 3399312 | 41474.9 |
| putative hydroxypyruvate reductase | OCAR_7443 | Q44472 | + | 3399518 - 3400801 | 44618.0 |
| phage integrase family protein | OCAR_7444 | P06155 | + | 3401060 - 3402304 | 45707.4 |
| hypothetical protein | OCAR_7445 | Not Available | + | 3402577 - 3403248 | 24447.0 |
| phage transcriptional regulator, alpa | OCAR_7446 | Not Available | + | 3403367 - 3403612 | 8626.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.