Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nlp/p60 | OCAR_7427 | Q736M3 | + | 3377834 - 3378697 | 31046.9 |
| glutathione import atp-binding protein gsia | OCAR_7428 | P33916 | - | 3378885 - 3380522 | 59471.4 |
| inner membrane abc transporter permease protein yeje | OCAR_7429 | P33915 | - | 3380528 - 3381700 | 43457.2 |
| binding-protein-dependent transport systems inner membrane component | OCAR_7430 | P0AFU1 | - | 3381697 - 3382806 | 40781.3 |
| bacterial extracellular solute-binding proteins, family 5 | OCAR_7431 | P55691 | - | 3382810 - 3384714 | 71272.1 |
| bacterial extracellular solute-binding proteins, family 5 | OCAR_7432 | P55691 | - | 3384669 - 3386546 | 71000.0 |
| hypothetical protein | OCAR_7433 | Not Available | + | 3386438 - 3386569 | 4976.06 |
| putative cytochrome c -like protein | OCAR_7434 | P30323 | - | 3386744 - 3387256 | 17828.5 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | OCAR_7435 | B6JJE4 | + | 3387478 - 3388221 | 26603.2 |
| prephenate dehydratase | OCAR_7436 | Q9SA96 | + | 3388218 - 3389156 | 33883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.