Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved domain protein | OCAR_7417 | Not Available | + | 3367405 - 3367569 | 5545.74 |
| peptidase a24a, prepilin type iv | OCAR_7418 | Not Available | + | 3367886 - 3368410 | 18498.0 |
| type ii and iii secretion system protein | OCAR_7419 | P55702 | + | 3368537 - 3369997 | 50788.8 |
| pilus assembly protein cpad | OCAR_7420 | Not Available | + | 3370018 - 3370761 | 26359.3 |
| pilus assembly protein | OCAR_7421 | Q55900 | + | 3370758 - 3372020 | 45160.0 |
| cpaf | OCAR_7422 | P9WMT2 | + | 3372039 - 3373508 | 53353.1 |
| type ii secretion system protein | OCAR_7423 | Not Available | + | 3373519 - 3374496 | 36136.9 |
| type ii secretion system protein | OCAR_7424 | Not Available | + | 3374506 - 3375483 | 36733.9 |
| tpr repeat protein | OCAR_7425 | Not Available | - | 3375517 - 3376320 | 28425.7 |
| leucine aminopeptidase | OCAR_7426 | Q3A831 | + | 3376468 - 3377841 | 48608.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.