Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-24 | OCAR_7407 | B3Q6P8 | + | 3359291 - 3359839 | 19915.5 |
| signal transduction histidine kinase | OCAR_7408 | A6X554 | - | 3359973 - 3361613 | 59599.4 |
| hypothetical protein | OCAR_7409 | Not Available | - | 3362049 - 3362165 | 4288.61 |
| hypothetical protein | OCAR_7410 | Not Available | - | 3362171 - 3362290 | 4576.8 |
| putative atp-dependent rna helicase rhle | OCAR_7411 | P25888 | + | 3362516 - 3364054 | 55639.6 |
| translation initiation factor if-1 | OCAR_7412 | P61693 | + | 3364073 - 3364354 | 10677.0 |
| conserved domain protein | OCAR_7413 | P55390 | + | 3364572 - 3364784 | 7505.81 |
| flp pilus assembly protein tadg | OCAR_7414 | Not Available | - | 3364918 - 3365511 | 21292.9 |
| tade family protein | OCAR_7415 | Not Available | - | 3365526 - 3366089 | 20513.7 |
| flp pilus assembly protein cpab | OCAR_7416 | Not Available | - | 3366243 - 3367061 | 28734.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.