Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase | OCAR_7377 | P44466 | + | 3333839 - 3335317 | 51840.2 |
| long-chain-fatty-acid--coa ligase | OCAR_7378 | P69452 | + | 3335599 - 3337284 | 61236.2 |
| conserved hypothetical protein | OCAR_7379 | Not Available | + | 3337281 - 3337835 | 20425.0 |
| polysaccharide biosynthesis protein | OCAR_7380 | Not Available | + | 3337936 - 3339312 | 49836.9 |
| d-beta-hydroxybutyrate dehydrogenase (bdh) | OCAR_7381 | O86034 | - | 3339494 - 3340282 | 27683.4 |
| allergen v5/tpx-1 family protein | OCAR_7382 | O31398 | - | 3340380 - 3340883 | 17658.1 |
| sulfate/thiosulfate import atp-binding protein cysa | OCAR_7383 | Q6NBT1 | - | 3341154 - 3342200 | 38477.3 |
| sulfate abc transporter, permease protein cysw | OCAR_7384 | P0AEB1 | - | 3342190 - 3343068 | 31446.3 |
| sulfate abc transporter, permease protein cyst | OCAR_7385 | P16701 | - | 3343077 - 3343904 | 29631.2 |
| thiosulfate-binding protein | OCAR_7386 | P0AG78 | - | 3343989 - 3344978 | 36326.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.