Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopropionate ammonia-lyase | OCAR_7357 | P66901 | - | 3314014 - 3315234 | 43105.2 |
| gamma-glutamyltransferase | OCAR_7358 | O05218 | - | 3315285 - 3316904 | 58052.7 |
| hypothetical protein | OCAR_7359 | B6JJ68 | - | 3316906 - 3317721 | 29960.6 |
| binding-protein-dependent transport systems inner membrane component | OCAR_7360 | Q9K9G6 | - | 3317745 - 3318563 | 29558.0 |
| aliphatic sulfonates import atp-binding protein ssub | OCAR_7361 | Q57855 | - | 3318579 - 3319397 | 30563.7 |
| putative membrane lipoprotein lipid attachment site | OCAR_7362 | Q9K9G5 | - | 3319484 - 3320437 | 33754.3 |
| transcriptional regulator, gntr family | OCAR_7363 | P37338 | + | 3320709 - 3321419 | 26367.5 |
| hypothetical protein | OCAR_7364 | Not Available | - | 3321454 - 3321570 | 3954.87 |
| membrane lipoprotein lipid attachment site | OCAR_7365 | Q9K9G5 | + | 3321849 - 3322823 | 34993.0 |
| xanthine dehydrogenase, small subunit | OCAR_7366 | Q12553 | + | 3322962 - 3324461 | 54291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.