Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase, cbb3-type, subunit iii | OCAR_7347 | Q05577 | + | 3304106 - 3304975 | 30700.0 |
| cytochrome c oxidase accessory protein ccog | OCAR_7348 | P18396 | + | 3305093 - 3306652 | 58204.8 |
| nitrogen fixation protein fixh | OCAR_7349 | P18397 | + | 3306649 - 3307146 | 18314.0 |
| cytochrome oxidase maturation protein, cbb3-type | OCAR_7350 | P18399 | + | 3307190 - 3307354 | 5741.8 |
| transcriptional regulator, gntr family | OCAR_7351 | Q8GAL4 | - | 3307380 - 3308108 | 26639.7 |
| acyl-coa synthetase | OCAR_7352 | O28341 | - | 3308175 - 3309548 | 49035.2 |
| zinc-binding alcohol dehydrogenase | OCAR_7353 | Q53FA7 | - | 3309642 - 3310700 | 38379.3 |
| glutaconate coa-transferase, subunit a | OCAR_7354 | O29069 | + | 3310837 - 3311799 | 35724.0 |
| 3-oxoadipate:succinyl-coa transferase subunit b | OCAR_7355 | Q8VPF2 | + | 3311792 - 3312565 | 27545.2 |
| peptidase family m20/m25/m40 | OCAR_7356 | A7MXC2 | - | 3312794 - 3314014 | 43089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.