Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nifu n-terminal domain-containing protein | OCA5_RS01390 | Not Available | + | 287300 - 287932 | 22385.7 |
| hypothetical protein | OCA5_RS01400 | Not Available | - | 288185 - 288448 | 9430.44 |
| bifunctional sulfur transferase/dioxygenase blh | OCA5_RS01405 | Not Available | - | 288531 - 289820 | 47040.6 |
| hypothetical protein | OCA5_RS01410 | Not Available | - | 289985 - 290644 | 23816.6 |
| tyrosine-type recombinase/integrase | OCA5_RS01415 | Not Available | + | 290969 - 292324 | 49459.8 |
| arsr/smtb family transcription factor | OCA5_RS01420 | Not Available | + | 292484 - 292855 | 13277.0 |
| arsenate reductase arsc | OCA5_RS01425 | Not Available | + | 292848 - 293375 | 18800.5 |
| arsenate reductase (glutaredoxin) | OCA5_RS01430 | Not Available | + | 293384 - 293809 | 15659.0 |
| acr3 family arsenite efflux transporter | OCA5_RS01435 | Not Available | + | 293819 - 294874 | 37914.7 |
| arsenical resistance protein arsh | OCA5_RS01440 | Not Available | + | 294874 - 295587 | 26708.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.