Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7327 | Not Available | + | 3285177 - 3286016 | 29938.7 |
| hybrid peroxiredoxin hyprx5 | OCAR_7328 | Q69TY4 | + | 3286081 - 3286566 | 17244.8 |
| ribonuclease hi | OCAR_7329 | B6JJ39 | - | 3286716 - 3287165 | 16749.8 |
| homoserine kinase | OCAR_7330 | B6JJ40 | - | 3287162 - 3288142 | 35466.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | OCAR_7331 | Q6N1Y1 | - | 3288277 - 3289278 | 36175.5 |
| protein of unknown function | OCAR_7332 | Not Available | + | 3289577 - 3290278 | 25905.9 |
| twin-arginine translocation pathway signal | OCAR_7333 | A1SHU2 | - | 3290498 - 3291223 | 25827.3 |
| putative lipoprotein | OCAR_7334 | Not Available | - | 3291268 - 3291528 | 9005.65 |
| conserved hypothetical protein | OCAR_7335 | Not Available | - | 3291538 - 3291744 | 7381.02 |
| propionate--coa ligase (propionyl-coa synthetase) | OCAR_7336 | P28812 | - | 3291825 - 3293744 | 69765.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.