Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | OCAR_7307 | P44905 | - | 3263217 - 3263798 | 20981.0 |
| conserved hypothetical protein | OCAR_7308 | Not Available | - | 3264207 - 3264590 | 14211.0 |
| conserved hypothetical protein | OCAR_7309 | Not Available | - | 3264587 - 3264952 | 13127.3 |
| transketolase | OCAR_7310 | P51010 | + | 3265324 - 3267288 | 69238.8 |
| glyceraldehyde-3-phosphate dehydrogenase, type i | OCAR_7311 | P51009 | + | 3267387 - 3268394 | 36070.3 |
| phosphoglycerate kinase | OCAR_7312 | Q89U95 | + | 3268505 - 3269704 | 42389.2 |
| fructose-bisphosphate aldolase class-i | OCAR_7313 | Q8P5Z7 | + | 3269815 - 3270843 | 37289.7 |
| thiamine monophosphate synthase | OCAR_7314 | B6INN5 | + | 3270969 - 3271658 | 24232.7 |
| sel1 | OCAR_7315 | Not Available | + | 3271655 - 3272716 | 37181.3 |
| inositol-1-monophosphatase (impase) | OCAR_7316 | Q98F59 | + | 3272844 - 3273632 | 28427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.