Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system-associated acyl-coa thioesterase | OCAR_7297 | P44679 | - | 3255849 - 3256373 | 19191.9 |
| hydrolase, nudix family | OCAR_7298 | P44932 | - | 3256370 - 3256777 | 14721.8 |
| holliday junction dna helicase ruvb | OCAR_7299 | Q2IS53 | - | 3256774 - 3257814 | 37475.9 |
| hypothetical protein | OCAR_7300 | Not Available | - | 3257811 - 3258302 | 17080.8 |
| holliday junction dna helicase ruva | OCAR_7301 | B6JIZ6 | - | 3258299 - 3258916 | 21596.1 |
| crossover junction endodeoxyribonuclease ruvc | OCAR_7302 | B6JIZ7 | - | 3259260 - 3259775 | 18213.6 |
| magnesium transporter | OCAR_7303 | Q5SMG8 | - | 3259814 - 3261181 | 49078.1 |
| hypothetical protein | OCAR_7304 | Not Available | - | 3261234 - 3261356 | 4670.76 |
| conserved hypothetical protein | OCAR_7305 | B6JJ00 | - | 3261469 - 3262215 | 26776.4 |
| conserved hypothetical protein | OCAR_7306 | O31775 | - | 3262383 - 3263216 | 29763.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.