Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthase | OCAR_7287 | Q9XBG6 | - | 3246920 - 3247936 | 36487.3 |
| tpr repeat protein | OCAR_7288 | Not Available | - | 3247911 - 3248930 | 36175.3 |
| ompa/motb domain protein | OCAR_7289 | Q8U9L5 | - | 3249175 - 3249657 | 17501.7 |
| tol-pal system beta propeller repeat protein tolb | OCAR_7290 | Q1QHQ6 | - | 3249913 - 3251262 | 49264.3 |
| protein tola | OCAR_7291 | Not Available | - | 3251301 - 3252239 | 34450.1 |
| protein tolr | OCAR_7292 | P0ABV4 | - | 3252241 - 3252693 | 15958.8 |
| protein tolq | OCAR_7293 | P50598 | - | 3252717 - 3253430 | 26069.6 |
| putative membrane protein | OCAR_7294 | Not Available | + | 3253818 - 3254510 | 25218.0 |
| conserved hypothetical protein | OCAR_7295 | Not Available | - | 3254567 - 3255049 | 19033.5 |
| transcriptional regulator, tetr family | OCAR_7296 | O69786 | - | 3255147 - 3255797 | 23430.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.