Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| erfk/ybis/ycfs/ynhg | OCAR_7267 | P39176 | - | 3222611 - 3223384 | 28084.2 |
| conserved hypothetical protein | OCAR_7268 | Not Available | + | 3223677 - 3224444 | 28078.2 |
| major facilitator superfamily mfs_1 | OCAR_7269 | S0ECK8 | - | 3224508 - 3225713 | 42154.9 |
| putative lipoprotein | OCAR_7270 | Not Available | - | 3225848 - 3226345 | 17681.1 |
| chaperonin gros | OCAR_7271 | P60366 | + | 3226653 - 3226949 | 10613.0 |
| chaperonin grol | OCAR_7272 | A4Z0U1 | + | 3227086 - 3228735 | 57670.9 |
| conserved hypothetical protein | OCAR_7273 | Not Available | + | 3228938 - 3230146 | 43067.6 |
| amine oxidase | OCAR_7274 | Q5BLE8 | + | 3230185 - 3231720 | 54149.7 |
| conserved hypothetical protein | OCAR_7275 | Not Available | - | 3231749 - 3232126 | 13401.2 |
| glycolate permease glca | OCAR_7276 | Q46839 | - | 3232298 - 3233959 | 58827.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.