Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7257 | Not Available | + | 3211837 - 3212292 | 17530.1 |
| 4-hydroxybenzoate polyprenyl transferase | OCAR_7258 | Q298G6 | - | 3212320 - 3213255 | 33483.2 |
| conserved hypothetical protein | OCAR_7259 | Not Available | - | 3213307 - 3214011 | 23921.8 |
| conserved hypothetical protein | OCAR_7260 | Q92J59 | + | 3214183 - 3214923 | 26844.4 |
| tonb-dependent receptor | OCAR_7261 | Q9JZN9 | + | 3215096 - 3217273 | 78013.6 |
| trna synthetase, class ii | OCAR_7262 | A9MDU5 | + | 3217451 - 3218578 | 39733.0 |
| atp phosphoribosyltransferase | OCAR_7263 | B6JIW1 | + | 3218575 - 3219552 | 34818.0 |
| bactoprenol glucosyl transferase | OCAR_7264 | Q55487 | + | 3219658 - 3220713 | 38392.6 |
| ydjc family protein | OCAR_7265 | A4W9L0 | + | 3220710 - 3221543 | 30580.8 |
| conserved hypothetical protein | OCAR_7266 | Q8K9W1 | + | 3221667 - 3222476 | 27983.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.