Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii, large subunit | OCAR_7248 | Q89DD2 | + | 3201674 - 3203134 | 52992.9 |
| hypothetical protein | OCAR_7247 | Not Available | - | 3203116 - 3203238 | 4711.52 |
| copper-containing nitrite reductase | OCAR_7249 | Q9JTB8 | + | 3203341 - 3205563 | 75941.4 |
| conserved hypothetical protein | OCAR_7250 | Not Available | + | 3205680 - 3205907 | 8247.93 |
| tetraacyldisaccharide 4'-kinase | OCAR_7251 | B6JIX8 | - | 3205963 - 3206976 | 35603.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | OCAR_7252 | P0AC77 | - | 3206969 - 3208273 | 47345.7 |
| protein of unknown function | OCAR_7253 | Q9ZE57 | - | 3208266 - 3208979 | 26674.4 |
| inositol monophosphatase family protein | OCAR_7254 | Not Available | - | 3208976 - 3209224 | 9093.81 |
| inositol-1 | OCAR_7255 | Q92M71 | - | 3209266 - 3210084 | 28803.3 |
| tldd/pmba family protein | OCAR_7256 | P0AFK1 | - | 3210071 - 3211423 | 46730.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.