Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7237 | Not Available | + | 3189813 - 3190583 | 27492.5 |
| peptidase m16 domain protein | OCAR_7238 | P55679 | + | 3190712 - 3192124 | 51510.5 |
| peptidase m16 domain protein | OCAR_7239 | P55680 | + | 3192121 - 3193470 | 48779.4 |
| class i peptide chain release factor | OCAR_7240 | P45388 | + | 3193648 - 3194064 | 15542.9 |
| dna mismatch repair protein | OCAR_7241 | B6JIV1 | + | 3194218 - 3196056 | 66007.8 |
| putative methyltransferase | OCAR_7242 | P0ADY0 | - | 3196234 - 3196788 | 19846.8 |
| pseudouridine synthase, rsu | OCAR_7243 | Q4UL59 | - | 3196998 - 3199079 | 78868.1 |
| pp_03196 | OCAR_7244 | Not Available | + | 3199123 - 3199668 | Not Available |
| acetyltransferase, gnat family protein | OCAR_7245 | Q8ZKE6 | - | 3199862 - 3200308 | 16788.3 |
| phosphoribosylamine--glycine ligase | OCAR_7246 | Q986A5 | - | 3200309 - 3201574 | 44646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.