Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| group iii truncated hemoglobin | OCA5_RS01340 | Not Available | - | 280577 - 281041 | 17428.8 |
| redoxin family protein | OCA5_RS01345 | Not Available | - | 281093 - 281563 | 16811.5 |
| pepsy domain-containing protein | OCA5_RS01350 | Not Available | - | 281689 - 281955 | 9487.6 |
| hypothetical protein | OCA5_RS01355 | Not Available | + | 282097 - 282357 | 9149.26 |
| pepsy domain-containing protein | OCA5_RS01360 | Not Available | + | 282439 - 282747 | 10900.4 |
| response regulator transcription factor | OCA5_RS01365 | Not Available | + | 282750 - 283415 | 24515.7 |
| sensor histidine kinase | OCA5_RS01370 | Not Available | + | 283412 - 284773 | 48908.9 |
| duf2249 domain-containing protein | OCA5_RS01375 | Not Available | + | 285031 - 285288 | 9656.44 |
| hypothetical protein | OCA5_RS01380 | Not Available | + | 285351 - 286700 | 46907.4 |
| duf2249 domain-containing protein | OCA5_RS01385 | Not Available | + | 286722 - 287252 | 18948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.