Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase (glutaredoxin) | OCA5_RS18005 | Not Available | - | 60152 - 60556 | 14965.2 |
| acr3 family arsenite efflux transporter | OCA5_RS18010 | Not Available | - | 60553 - 61608 | 37371.4 |
| arsenate reductase arsc | OCA5_RS18015 | Not Available | - | 61611 - 62138 | 18699.3 |
| arsr/smtb family transcription factor | OCA5_RS18020 | Not Available | - | 62131 - 62496 | 13284.1 |
| arsr/smtb family transcription factor | OCA5_RS18025 | Not Available | + | 62621 - 62944 | 11581.2 |
| fad-dependent oxidoreductase | OCA5_RS18030 | Not Available | + | 62994 - 64361 | 47567.4 |
| mfs transporter | OCA5_RS18035 | Not Available | + | 64372 - 65553 | 40727.5 |
| divalent metal ion exporter subunit ihpa | OCA5_RS18045 | Not Available | + | 66088 - 67359 | 45752.1 |
| divalent metal ion exporter adaptor subunit ihpb | OCA5_RS18050 | Not Available | + | 67356 - 68303 | 33869.5 |
| p-ii family nitrogen regulator | OCA5_RS18055 | Not Available | + | 68293 - 68655 | 13462.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.