Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase | OCAR_7227 | Q9HYT3 | + | 3178224 - 3179672 | 51469.1 |
| had-superfamily subfamily iia hydrolase | OCAR_7228 | P46351 | + | 3179941 - 3180801 | 31543.7 |
| outer membrane protein, 31 kda | OCAR_7229 | Q52866 | - | 3180897 - 3181238 | 11879.0 |
| outer membrane protein | OCAR_7230 | P0A3U4 | - | 3181328 - 3181639 | 10529.5 |
| two-component response regulator | OCAR_7231 | Q9FAD7 | - | 3182124 - 3182510 | 14137.2 |
| riboflavin biosynthesis protein ribf | OCAR_7232 | P44957 | + | 3182716 - 3183699 | 35309.2 |
| hypothetical protein | OCAR_7233 | Not Available | - | 3183760 - 3183918 | 5852.27 |
| isoleucyl-trna synthetase | OCAR_7234 | Q3SPJ6 | + | 3183964 - 3186933 | 110571.0 |
| tonb-dependent receptor | OCAR_7235 | Q87KN9 | - | 3187026 - 3189164 | 79552.5 |
| signal peptidase ii | OCAR_7236 | Q1QIP9 | + | 3189276 - 3189776 | 17708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.