Afipia carboxidovorans OM5

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia carboxidovorans OM5 is a Gram-negative, rod-shaped bacterium characterized by its ability to metabolize carbon monoxide as a chemolithoautotrophic energy source. This microbe thrives in diverse habitats, which suggests a remarkable adaptability to various environmental conditions. As an aerobe, A. carboxidovorans OM5 requires oxygen for growth, indicating its reliance on aerobic metabolic pathways to sustain its energy demands. The chemolithoautotrophic nature of A. carboxidovorans OM5 positions it uniquely within microbial communities, as it can utilize inorganic compounds for energy while fixing carbon dioxide for biomass production. This metabolic strategy not only allows it to occupy ecological niches where organic carbon may be limited but also contributes to the cycling of carbon and other nutrients, potentially influencing local ecosystem dynamics. Furthermore, the presence of A. carboxidovorans OM5 in multiple habitats raises intriguing questions about its ecological roles and interactions with other microbial species. Its capacity to utilize carbon monoxide may also suggest a potential involvement in biogeochemical cycles, particularly in environments where this gas is prevalent, such as in the aftermath of combustion processes. Understanding the specific contributions of A. carboxidovorans OM5 to its ecosystems could provide insights into microbial responses to environmental changes and the overall functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxidovorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Afipia carboxidovorans OM5
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemolithoautotroph
PathogenicityNot Available

Genome Summary

Afipia carboxidovorans OM5

Accession NumberNC_015685.1

Gene Summary

Adenine Count

32940 bp

Thymine Count

32945 bp

Guanine Count

51526 bp

Cytosine Count

49858 bp

Genome Length

167269 bp

Protein-coding Genes

159 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
diguanylate phosphodiesteraseOCAR_7227Q9HYT3+3178224 - 317967251469.1
had-superfamily subfamily iia hydrolaseOCAR_7228P46351+3179941 - 318080131543.7
outer membrane protein, 31 kdaOCAR_7229Q52866-3180897 - 318123811879.0
outer membrane proteinOCAR_7230P0A3U4-3181328 - 318163910529.5
two-component response regulatorOCAR_7231Q9FAD7-3182124 - 318251014137.2
riboflavin biosynthesis protein ribfOCAR_7232P44957+3182716 - 318369935309.2
hypothetical proteinOCAR_7233Not Available-3183760 - 31839185852.27
isoleucyl-trna synthetaseOCAR_7234Q3SPJ6+3183964 - 3186933110571.0
tonb-dependent receptorOCAR_7235Q87KN9-3187026 - 318916479552.5
signal peptidase iiOCAR_7236Q1QIP9+3189276 - 318977617708.0

Displaying genes 6981 – 6990 of 7526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites