Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t2 family | OCAR_7217 | Q07465 | - | 3169905 - 3170591 | 25243.3 |
| conserved hypothetical protein | OCAR_7218 | Not Available | - | 3170711 - 3171196 | 17538.8 |
| conserved hypothetical protein | OCAR_7219 | Not Available | + | 3171360 - 3171662 | 10634.8 |
| conserved domain protein | OCAR_7220 | Q89DI3 | - | 3171709 - 3171906 | 7092.73 |
| histidyl-trna synthetase | OCAR_7221 | B3QII5 | - | 3171937 - 3173559 | 60047.5 |
| dna methyltransferase | OCAR_7222 | P44116 | + | 3173814 - 3174188 | 14248.0 |
| conserved hypothetical protein | OCAR_7223 | Not Available | - | 3174281 - 3176113 | 62351.8 |
| tade family protein | OCAR_7224 | Not Available | - | 3176110 - 3176547 | 15601.8 |
| hypothetical protein | OCAR_7225 | Not Available | - | 3176596 - 3176757 | 5813.8 |
| omega-amino acid--pyruvate aminotransferase | OCAR_7226 | Q9A3Q9 | + | 3176746 - 3178086 | 47980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.