Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_7207 | Not Available | - | 3162459 - 3162587 | 4182.74 |
| cytidine/deoxycytidylate deaminase family protein | OCAR_7208 | O34598 | - | 3162658 - 3163122 | 16563.7 |
| protein-(glutamine-n5) methyltransferase | OCAR_7209 | Q89DG5 | - | 3163143 - 3164117 | 35385.5 |
| molybdopterin converting factor, subunit 2 | OCAR_7210 | Q984P0 | - | 3164117 - 3164590 | 17644.0 |
| molybdopterin converting factor, subunit 1 | OCAR_7211 | P30748 | - | 3164652 - 3164903 | 9096.89 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | OCAR_7212 | Q3IYX7 | - | 3164903 - 3165505 | 22178.4 |
| excinuclease abc, c subunit | OCAR_7213 | Q1QIR5 | - | 3165597 - 3167681 | 76740.5 |
| outer membrane protein omp31 | OCAR_7214 | P0A3U4 | + | 3167901 - 3168527 | 22097.6 |
| putative cold-shock' dna-binding domain | OCAR_7215 | P55390 | - | 3168613 - 3168828 | 7697.27 |
| conserved hypothetical protein | OCAR_7216 | P37634 | - | 3168966 - 3169829 | 31886.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.