Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase (rppk) | OCAR_7197 | Q89DJ1 | + | 3153996 - 3154991 | 35515.8 |
| hypothetical protein | OCAR_7198 | Not Available | + | 3155203 - 3155328 | 4555.4 |
| conserved hypothetical protein | OCAR_7199 | Not Available | + | 3155414 - 3155914 | 18530.1 |
| pyrroline-5-carboxylate reductase | OCAR_7200 | P22008 | + | 3156035 - 3156868 | 28165.4 |
| two-component hybrid sensor and regulator | OCAR_7201 | P41406 | - | 3156902 - 3158290 | 51129.1 |
| protein petr | OCAR_7202 | P31079 | - | 3158337 - 3159062 | 26926.6 |
| transcriptional regulator of marr family | OCAR_7203 | P31078 | - | 3159059 - 3159580 | 19705.0 |
| hypothetical protein | OCAR_7204 | Not Available | - | 3159614 - 3159739 | 4883.77 |
| branched-chain amino acid aminotransferase | OCAR_7205 | O86505 | + | 3159844 - 3160956 | 40214.9 |
| multidrug resistance protein norm | OCAR_7206 | Q98D15 | - | 3161023 - 3162450 | 51319.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.