Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7187 | Not Available | + | 3145492 - 3145800 | 11434.4 |
| gtp-binding protein ychf | OCAR_7188 | Q9CP90 | - | 3145821 - 3146918 | 39541.3 |
| peptidyl-trna hydrolase | OCAR_7189 | B6JIP3 | - | 3147061 - 3147666 | 22150.5 |
| ribosomal protein l25, ctc-form | OCAR_7190 | B6JIP4 | - | 3147682 - 3148404 | 24688.8 |
| response regulator receiver | OCAR_7191 | Q9HWS0 | + | 3148716 - 3149798 | 40239.4 |
| conserved domain protein | OCAR_7192 | Not Available | - | 3149957 - 3150211 | 9470.29 |
| prolipoprotein diacylglyceryl transferase | OCAR_7193 | Q07RP9 | + | 3150430 - 3151290 | 31222.1 |
| aby | OCAR_7194 | Q9VGR2 | + | 3151287 - 3152396 | 40286.4 |
| conserved hypothetical protein | OCAR_7195 | Q9RT03 | + | 3152393 - 3153157 | 27098.9 |
| putative lipoprotein | OCAR_7196 | Not Available | + | 3153256 - 3153879 | 21129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.