Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transmembrane signal peptide protein | OCAR_7177 | Not Available | - | 3134481 - 3134882 | 14698.3 |
| phospholipid/glycerol acyltransferase | OCAR_7178 | Q2YQS9 | + | 3135107 - 3135895 | 28236.8 |
| conserved hypothetical protein | OCAR_7179 | Not Available | + | 3135961 - 3136164 | 7298.78 |
| glutathione s-transferase | OCAR_7180 | P27457 | - | 3136181 - 3136876 | 26501.7 |
| glutathione s-transferase | OCAR_7181 | P77526 | - | 3136880 - 3137578 | 26657.2 |
| putative membrane protein | OCAR_7182 | Not Available | + | 3137774 - 3138823 | 37964.9 |
| excinuclease abc subunit b | OCAR_7183 | Q98I01 | + | 3138864 - 3141809 | 109236.0 |
| atp-binding protein of abc transporter, duplicated atpase domains | OCAR_7184 | P63390 | - | 3141969 - 3143591 | 59578.2 |
| putative exported protein of unknown function | OCAR_7185 | Not Available | + | 3143889 - 3144734 | 29652.7 |
| conserved hypothetical protein | OCAR_7186 | Not Available | + | 3144887 - 3145288 | 14582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.