Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | OCAR_7167 | Q7VPI9 | + | 3124442 - 3125593 | 42207.5 |
| putative lipoprotein | OCAR_7168 | Not Available | - | 3125657 - 3126280 | 21349.9 |
| shikimate 5-dehydrogenase | OCAR_7169 | B6JIM2 | - | 3126337 - 3127170 | 29704.7 |
| sulfate permease family protein | OCAR_7170 | O06984 | - | 3127207 - 3128964 | 61741.9 |
| protein of unknown function | OCAR_7171 | Not Available | - | 3128961 - 3129440 | 16081.3 |
| protein of unknown function | OCAR_7172 | Not Available | - | 3129600 - 3130121 | 18178.9 |
| aspartate aminotransferase a | OCAR_7173 | Q02635 | - | 3130420 - 3131622 | 42988.5 |
| putative membrane protein | OCAR_7174 | Not Available | + | 3131851 - 3133092 | 44641.3 |
| glutathione s-transferase | OCAR_7175 | Q52828 | + | 3133298 - 3133954 | 24982.1 |
| hypothetical protein | OCAR_7176 | Not Available | + | 3134092 - 3134286 | 6624.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.