Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase | OCAR_7157 | P35136 | - | 3115256 - 3116845 | 55998.0 |
| phosphoserine aminotransferase | OCAR_7158 | Q8TNI1 | - | 3116972 - 3118144 | 41847.3 |
| conserved hypothetical protein | OCAR_7159 | Not Available | + | 3118232 - 3118375 | 4944.12 |
| transporter, dme family | OCAR_7160 | Not Available | + | 3118333 - 3119163 | 28763.1 |
| conserved hypothetical protein | OCAR_7161 | Q45335 | - | 3119178 - 3120011 | 29599.8 |
| porin, opacity type | OCAR_7162 | Q8FVC3 | - | 3120157 - 3120975 | 29785.1 |
| fosmidomycin resistance protein | OCAR_7163 | P52067 | - | 3121198 - 3122448 | 44489.9 |
| phosphoglucosamine mutase | OCAR_7164 | B6JIL2 | - | 3122607 - 3123953 | 48449.8 |
| hypothetical protein | OCAR_7165 | Not Available | + | 3123963 - 3124106 | 5477.78 |
| conserved hypothetical protein | OCAR_7166 | Not Available | - | 3124164 - 3124337 | 6522.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.