Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7147 | Not Available | - | 3106827 - 3107111 | 9880.37 |
| ribosomal large subunit pseudouridine synthase d | OCAR_7148 | P50513 | + | 3107110 - 3108210 | 39258.8 |
| alternative sigma factor rpoh | OCAR_7149 | P50507 | + | 3108434 - 3109333 | 34135.0 |
| hypothetical protein | OCAR_7150 | Not Available | - | 3109392 - 3109850 | 16838.1 |
| hypothetical protein | OCAR_7151 | Not Available | - | 3109981 - 3110133 | 5780.02 |
| conserved hypothetical protein | OCAR_7152 | Not Available | + | 3110191 - 3110409 | 7523.98 |
| putative formyl transferase | OCAR_7153 | Q9WYZ8 | - | 3110486 - 3111103 | 21929.5 |
| conserved hypothetical protein | OCAR_7154 | Not Available | - | 3111091 - 3112638 | 54986.0 |
| adenylosuccinate synthetase | OCAR_7155 | Q3SNC6 | - | 3112725 - 3114245 | 55392.7 |
| permeases of the drug/metabolite transporter | OCAR_7156 | P37511 | + | 3114254 - 3115174 | 33647.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.