Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_7137 | Not Available | - | 3099124 - 3099246 | 4557.86 |
| cytochrome c oxidase, cbb3-type, subunit i | OCAR_7138 | Q03073 | + | 3099648 - 3101300 | 61649.2 |
| cytochrome c oxidase, cbb3-type, subunit ii | OCAR_7139 | Not Available | + | 3101306 - 3102037 | 26869.1 |
| cytochrome c oxidase, cbb3-type, ccoq subunit | OCAR_7140 | Not Available | + | 3102040 - 3102231 | 7214.61 |
| cytochrome c oxidase, cbb3-type, subunit iii | OCAR_7141 | A4YQU0 | + | 3102238 - 3103119 | 32192.9 |
| hypothetical protein | OCAR_7142 | Not Available | + | 3103116 - 3103328 | 7348.1 |
| conserved hypothetical protein | OCAR_7143 | Not Available | + | 3103341 - 3104150 | 28803.5 |
| copper-translocating p-type atpase | OCAR_7144 | P18398 | + | 3104219 - 3106492 | 79097.7 |
| cytochrome oxidase maturation protein, cbb3-type | OCAR_7145 | P18399 | + | 3106492 - 3106644 | 5415.61 |
| Trna-glu | Not Available | Not Available | + | 3106688 - 3106762 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.