Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | OCAR_7127 | A7NKU8 | - | 3091365 - 3092381 | 35998.2 |
| hypothetical protein | OCAR_7128 | Not Available | + | 3092385 - 3092516 | 5124.25 |
| glycosyl transferase, group 1 | OCAR_7129 | Q59002 | + | 3092513 - 3093667 | 42732.9 |
| hypothetical protein | OCAR_7130 | Not Available | - | 3093879 - 3094028 | 5718.98 |
| ferredoxin-1 | OCAR_7131 | Q45972 | + | 3094020 - 3094361 | 12893.1 |
| sensor protein fixl | OCAR_7132 | P23222 | + | 3094437 - 3095960 | 56157.8 |
| transcriptional regulatory protein fixj | OCAR_7133 | P23221 | + | 3095950 - 3096567 | 22194.1 |
| response regulator receiver domain protein | OCAR_7134 | P26487 | + | 3096647 - 3097042 | 14476.3 |
| nitrogen fixation regulation protein fixk, crp/fnr family | OCAR_7136 | P26488 | + | 3097163 - 3097861 | 25627.6 |
| nnrs family protein | OCAR_7135 | Not Available | - | 3097834 - 3099030 | 42485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.