Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7117 | Q2YQA5 | - | 3082501 - 3083139 | 22470.1 |
| protein cysq | OCAR_7118 | P59735 | + | 3083324 - 3084157 | 28875.5 |
| yhs domain protein | OCAR_7119 | Not Available | - | 3084163 - 3084651 | 17562.8 |
| conserved hypothetical protein | OCAR_7120 | Not Available | + | 3084801 - 3085373 | 20251.2 |
| conserved hypothetical protein | OCAR_7121 | Not Available | + | 3085501 - 3086751 | 45920.7 |
| Trna-val | Not Available | Not Available | + | 3086829 - 3086903 | Not Available |
| erfk/ybis/ycfs/ynhg | OCAR_7123 | P39176 | + | 3087069 - 3087641 | 20895.3 |
| conserved hypothetical protein | OCAR_7125 | Not Available | + | 3087644 - 3088450 | 30422.5 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | OCAR_7124 | Q9I3S1 | - | 3088447 - 3089928 | 53083.7 |
| uroporphyrinogen decarboxylase | OCAR_7126 | A4YPC0 | + | 3090169 - 3091212 | 37746.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.