Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7107 | Not Available | - | 3071606 - 3072661 | 36494.3 |
| sigma-70 region 2 | OCAR_7108 | A1TEV0 | - | 3072658 - 3073203 | 20338.3 |
| flagellar export protein flij | OCAR_7109 | Not Available | - | 3073403 - 3073822 | 16135.1 |
| flagellar protein export atpase flii | OCAR_7110 | P0CAT8 | - | 3073929 - 3075254 | 47159.2 |
| cell cycle transcriptional regulator ctra | OCAR_7111 | B2S753 | + | 3075660 - 3076361 | 26107.8 |
| chemotaxis protein methyltransferase 1 | OCAR_7112 | O87131 | - | 3076603 - 3077469 | 32571.8 |
| chemotaxis response regulator protein-glutamate methylesterase | OCAR_7113 | Q20YL8 | - | 3077466 - 3078632 | 40724.8 |
| response regulator receiver | OCAR_7114 | A8FMH1 | - | 3078704 - 3079111 | 15262.7 |
| chew protein | OCAR_7115 | O87715 | - | 3079108 - 3079575 | 17110.9 |
| chea signal transduction histidine kinases | OCAR_7116 | O25153 | - | 3079586 - 3082324 | 98617.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.