Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase sdr | OCAR_7097 | Q9L9F8 | - | 3063109 - 3063903 | 28374.3 |
| regulatory protein | OCAR_7098 | P37335 | + | 3064190 - 3064918 | 26501.8 |
| conserved hypothetical protein | OCAR_7099 | Not Available | - | 3065224 - 3065508 | 9781.92 |
| tonb protein | OCAR_7100 | Not Available | + | 3065910 - 3066125 | 8143.06 |
| hypothetical protein | OCAR_7101 | Not Available | - | 3066341 - 3066526 | 6884.28 |
| hypothetical protein | OCAR_7102 | Not Available | + | 3066525 - 3066665 | 4935.07 |
| methyl-accepting chemotaxis sensory transducer | OCAR_7103 | Q882Z2 | + | 3067026 - 3068129 | 40196.7 |
| Trna-met | Not Available | Not Available | + | 3068257 - 3068332 | Not Available |
| flagellar biosynthesis protein flha | OCAR_7105 | Q03845 | + | 3068574 - 3070703 | 75327.4 |
| conserved hypothetical protein | OCAR_7106 | Not Available | + | 3071026 - 3071238 | 7354.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.