Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amis/urei transporter | OCAR_7087 | Q51417 | - | 3049927 - 3050439 | 18355.1 |
| formamidase | OCAR_7088 | Q50228 | - | 3050518 - 3051744 | 44438.8 |
| dna-binding response regulator ompr | OCAR_7090 | Q9HUI2 | + | 3051991 - 3052716 | 27432.1 |
| multi-sensor hybrid histidine kinase | OCAR_7089 | Q881J7 | - | 3052680 - 3054302 | 58735.5 |
| integral membrane sensor signal transduction histidine kinase | OCAR_7091 | A7HD43 | - | 3054295 - 3056946 | 96305.1 |
| pyruvate dehydrogenase alpha subunit | OCAR_7092 | Q59097 | - | 3057073 - 3059484 | 88219.8 |
| alpha/beta hydrolase fold protein | OCAR_7093 | Not Available | - | 3059499 - 3060407 | 33202.4 |
| hypothetical protein | OCAR_7094 | Q8YDR6 | - | 3060415 - 3061401 | 35808.8 |
| binding-protein-dependent transport systems inner membrane component | OCAR_7095 | Q9K9G6 | - | 3061447 - 3062286 | 30445.7 |
| nitrate transport atp-binding protein nrtc | OCAR_7096 | Q57855 | - | 3062283 - 3063053 | 28789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.