Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioesterase superfamily | OCAR_7077 | O66120 | - | 3038616 - 3039077 | 16361.7 |
| auxin efflux carrier | OCAR_7078 | P56949 | - | 3039341 - 3040282 | 33166.8 |
| major facilitator family transporter | OCAR_7079 | P37498 | + | 3040489 - 3041760 | 45016.9 |
| glycosyltransferase | OCAR_7080 | P9WMY8 | - | 3041771 - 3042787 | 36362.7 |
| polysaccharide biosynthesis protein | OCAR_7081 | Not Available | - | 3042800 - 3044026 | 44242.6 |
| cellulose synthesis regulatory protein | OCAR_7082 | Q8Z5R0 | - | 3044283 - 3045476 | 42558.8 |
| hypothetical protein | OCAR_7083 | Not Available | - | 3045538 - 3045690 | 5404.68 |
| conserved hypothetical protein | OCAR_7084 | Not Available | - | 3045769 - 3047706 | 70226.8 |
| 2-dehydropantoate 2-reductase | OCAR_7085 | Q987N5 | - | 3048139 - 3049218 | 39162.3 |
| glutamine amidotransferase, class-ii | OCAR_7086 | Q50229 | - | 3049559 - 3049858 | 10778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.