Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malto-oligosyltrehalose trehalohydrolase | OCAR_7067 | Q9RX51 | + | 3026747 - 3028489 | 65137.4 |
| malto-oligosyltrehalose synthase | OCAR_7068 | Q44315 | + | 3028489 - 3031278 | 103896.0 |
| hypothetical protein | OCAR_7069 | Not Available | - | 3031329 - 3031445 | 4190.9 |
| conserved hypothetical protein | OCAR_7070 | Not Available | + | 3031475 - 3031786 | 11584.1 |
| succinate-semialdehyde dehydrogenase | OCAR_7071 | Q1JUP4 | - | 3031873 - 3033306 | 51026.4 |
| conserved hypothetical protein | OCAR_7072 | Not Available | + | 3033654 - 3034067 | 15599.2 |
| hypothetical protein | OCAR_7073 | Not Available | - | 3034225 - 3034434 | 7680.42 |
| methylisocitrate lyase | OCAR_7074 | P54528 | - | 3034800 - 3035711 | 32642.4 |
| 2-methylcitrate synthase | OCAR_7075 | Q937N9 | - | 3035721 - 3036896 | 42740.2 |
| 2-methylcitrate dehydratase 2 | OCAR_7076 | Q8NSL3 | - | 3037079 - 3038596 | 55107.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.